PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016648675.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 499aa    MW: 54218.9 Da    PI: 7.7851
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016648675.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.81.3e-36672352134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................... 65 
                      g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a +ai el+++                               
  XP_016648675.1  67 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAAEAIAELPSLnnsfpdtpkqlsdekrascehgfdsaevele 161
                     689*************************************************************9999999999988888888885555555444 PP

             TCP  66 ...ssssasec....eaesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                                     +++++++++n+s+  + +++a+s++s++s+ s l+l++      r kar+rarer ++++ +++
  XP_016648675.1 162 ghgH------GdpnyHHHQNQNQTQNQSQYLSLSKSACSSNSETSKGSGLSLSRseirVNRVKARERARERAAKDKEKES 235
                     3321......0222356677777777777777888888888888888888888853335559999999998877776654 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.2E-4468233IPR005333Transcription factor, TCP
PROSITE profilePS5136931.40769127IPR017887Transcription factor TCP subgroup
PROSITE profilePS513709.441213233IPR017888CYC/TB1, R domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:1903508Biological Processpositive regulation of nucleic acid-templated transcription
GO:2000306Biological Processpositive regulation of photomorphogenesis
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MEVEEIQAQA CKFPRIGNGS SRATNPAADD EDQDPSCLDF KRDTTADAGN RLRGWHHSRI  60
IRVSRASGGK DRHSKVWTSK GLRDRRVRLS VTTAIQFYDL QDRLGYDQPS KAVEWLIKAA  120
AEAIAELPSL NNSFPDTPKQ LSDEKRASCE HGFDSAEVEL EGHGHGDPNY HHHQNQNQTQ  180
NQSQYLSLSK SACSSNSETS KGSGLSLSRS EIRVNRVKAR ERARERAAKD KEKESNESAS  240
HIAHHPQQNS SNLNNSISQS ASFTELLTGG IGTNSSNNNN SPTAAAHQQQ NHGGGGGEPI  300
LFHKAAAAGG GGPMDYFSSG LLGLSSSTRT HHSSGFPGQI QLGMNSIPQT MSVVSPFSVS  360
GDHHHNHNPE LQHFSFVPDH LIPVTTSSQP GNGGDYNLNF SISSSGGLAG FNRGTLQSNS  420
SSSPSLLPHH LQRFSPIDGS SNVPFFIGAA AAPTMENHHH HHHHHQQHQQ QFPAGFDRRL  480
QHPYGDGSRH SDHKGKAKN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00006PBMTransfer from 493022Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008225508.10.0PREDICTED: transcription factor TCP2
RefseqXP_008225509.10.0PREDICTED: transcription factor TCP2
RefseqXP_008225510.10.0PREDICTED: transcription factor TCP2
RefseqXP_008225511.10.0PREDICTED: transcription factor TCP2
TrEMBLM5WID20.0M5WID2_PRUPE; Uncharacterized protein
STRINGVIT_10s0003g03910.t011e-169(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.22e-35TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2